Cluster: SW171_30_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_72389 | k141_72389_92 | 107397 | 108695 | - | GH1 |
| CAZyme | k141_72389 | k141_72389_93 | 108734 | 111178 | - | GH94 |
| TF | k141_72389 | k141_72389_94 | 111550 | 112563 | + | LacI |
| NULL(UNKNOWN) | k141_72389 | k141_72389_95 | 112633 | 114003 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_72389 | k141_72389_96 | 114112 | 115050 | + | 3.A.1.1.4 |
| TC | k141_72389 | k141_72389_97 | 115066 | 115944 | + | 3.A.1.1.36 |
Gene ID: k141_72389_92
Type: CAZyme
Location: 107397 - 108695 (-)
Type: CAZyme
Location: 107397 - 108695 (-)
Gene ID: k141_72389_93
Type: CAZyme
Location: 108734 - 111178 (-)
Type: CAZyme
Location: 108734 - 111178 (-)
Gene ID: k141_72389_94
Type: TF
Location: 111550 - 112563 (+)
Type: TF
Location: 111550 - 112563 (+)
Gene ID: k141_72389_95
Type:
Location: 112633 - 114003 (+)
Type:
Location: 112633 - 114003 (+)
Gene ID: k141_72389_96
Type: TC
Location: 114112 - 115050 (+)
Type: TC
Location: 114112 - 115050 (+)
Gene ID: k141_72389_97
Type: TC
Location: 115066 - 115944 (+)
Type: TC
Location: 115066 - 115944 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_72389_92 | vegan > omnivore | 1.31922 | 0.00770 |
| k141_72389_92 | vegetarian > omnivore | 1.16504 | 0.01456 |
| k141_72389_94 | vegetarian > omnivore | 1.74135 | 0.01456 |