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Cluster: SW168_maxbin.008_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42436 k141_42436_69 67980 69674 + 4.A.3.1.1
STP k141_42436 k141_42436_70 69837 70160 + DeoRC
pfam k141_42436 k141_42436_71 70214 71446 - Fic
CAZyme k141_42436 k141_42436_72 71814 73235 - GH1
TC k141_42436 k141_42436_73 73311 75098 - 4.A.3.1.1
TF k141_42436 k141_42436_74 75374 76384 + LacI
TC k141_42436 k141_42436_75 76718 78478 - 4.A.3.1.1
CAZyme k141_42436 k141_42436_76 78655 80097 - GH1
TF k141_42436 k141_42436_77 80439 81476 + LacI
CAZyme k141_42436 k141_42436_78 81738 83177 - GH1
TC k141_42436 k141_42436_79 83244 85019 - 4.A.3.1.1
TF k141_42436 k141_42436_80 85376 86380 + LacI
TC k141_42436 k141_42436_81 86595 86933 + 4.A.3.1.2
Gene ID: k141_42436_69
Type: TC
Location: 67980 - 69674 (+)
Gene ID: k141_42436_70
Type: STP
Location: 69837 - 70160 (+)
Gene ID: k141_42436_71
Type: pfam
Location: 70214 - 71446 (-)
Gene ID: k141_42436_72
Type: CAZyme
Location: 71814 - 73235 (-)
Gene ID: k141_42436_73
Type: TC
Location: 73311 - 75098 (-)
Gene ID: k141_42436_74
Type: TF
Location: 75374 - 76384 (+)
Gene ID: k141_42436_75
Type: TC
Location: 76718 - 78478 (-)
Gene ID: k141_42436_76
Type: CAZyme
Location: 78655 - 80097 (-)
Gene ID: k141_42436_77
Type: TF
Location: 80439 - 81476 (+)
Gene ID: k141_42436_78
Type: CAZyme
Location: 81738 - 83177 (-)
Gene ID: k141_42436_79
Type: TC
Location: 83244 - 85019 (-)
Gene ID: k141_42436_80
Type: TF
Location: 85376 - 86380 (+)
Gene ID: k141_42436_81
Type: TC
Location: 86595 - 86933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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