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Cluster: SW168_maxbin.008_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34342 k141_34342_10 13708 15390 + 2.A.66.4.4
pfam k141_34342 k141_34342_11 15397 17337 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_34342 k141_34342_12 17702 19315 + 3.A.1.5.27
TC k141_34342 k141_34342_13 19473 20429 + 3.A.1.5.38
TC k141_34342 k141_34342_14 20433 22448 + 3.A.1.5.25
TC k141_34342 k141_34342_15 22449 23276 + 3.A.1.5.27
CAZyme k141_34342 k141_34342_16 23408 24334 + CE7
Gene ID: k141_34342_10
Type: TC
Location: 13708 - 15390 (+)
Gene ID: k141_34342_11
Type: pfam
Location: 15397 - 17337 (+)
Gene ID: k141_34342_12
Type: TC
Location: 17702 - 19315 (+)
Gene ID: k141_34342_13
Type: TC
Location: 19473 - 20429 (+)
Gene ID: k141_34342_14
Type: TC
Location: 20433 - 22448 (+)
Gene ID: k141_34342_15
Type: TC
Location: 22449 - 23276 (+)
Gene ID: k141_34342_16
Type: CAZyme
Location: 23408 - 24334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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