dbCAN Logo

Cluster: SW162_30_sub_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24226 k141_24226_33 47939 49321 - GH4
TC k141_24226 k141_24226_34 49325 50119 - 4.A.1.1.16
TC k141_24226 k141_24226_35 50116 50940 - 4.A.1.1.13
pfam k141_24226 k141_24226_36 51040 51894 - PRD | PRD | CAT_RBD
TC k141_24226 k141_24226_37 51913 52425 - 4.A.1.2.5
STP k141_24226 k141_24226_38 52706 53467 - Fer4
TC k141_24226 k141_24226_39 54086 56329 - 1.I.1.1.3
STP k141_24226 k141_24226_40 56829 57791 + FHA
STP k141_24226 k141_24226_41 57963 60047 + Pkinase
TC k141_24226 k141_24226_42 60540 62882 + 3.A.3.5.15
Gene ID: k141_24226_33
Type: CAZyme
Location: 47939 - 49321 (-)
Gene ID: k141_24226_34
Type: TC
Location: 49325 - 50119 (-)
Gene ID: k141_24226_35
Type: TC
Location: 50116 - 50940 (-)
Gene ID: k141_24226_36
Type: pfam
Location: 51040 - 51894 (-)
Gene ID: k141_24226_37
Type: TC
Location: 51913 - 52425 (-)
Gene ID: k141_24226_38
Type: STP
Location: 52706 - 53467 (-)
Gene ID: k141_24226_39
Type: TC
Location: 54086 - 56329 (-)
Gene ID: k141_24226_40
Type: STP
Location: 56829 - 57791 (+)
Gene ID: k141_24226_41
Type: STP
Location: 57963 - 60047 (+)
Gene ID: k141_24226_42
Type: TC
Location: 60540 - 62882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List