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Cluster: SW162_30_sub_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_150246 k141_150246_12 15620 16996 - GH13_20
TC k141_150246 k141_150246_13 17150 18346 - 2.A.1.2.18
TC k141_150246 k141_150246_14 18467 20827 - 9.A.8.1.6
peptidase k141_150246 k141_150246_15 21299 22198 - S09.UPW
TC k141_150246 k141_150246_16 22442 23005 + 4.A.1.2.6
pfam k141_150246 k141_150246_17 23187 24590 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) k141_150246 k141_150246_18 24840 25625 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_150246 k141_150246_19 25786 26766 + 3.A.1.34.1
TC k141_150246 k141_150246_20 26971 27894 + 3.A.1.34.1
TC k141_150246 k141_150246_21 27887 28681 + 3.A.1.34.1
Gene ID: k141_150246_12
Type: CAZyme
Location: 15620 - 16996 (-)
Gene ID: k141_150246_13
Type: TC
Location: 17150 - 18346 (-)
Gene ID: k141_150246_14
Type: TC
Location: 18467 - 20827 (-)
Gene ID: k141_150246_15
Type: peptidase
Location: 21299 - 22198 (-)
Gene ID: k141_150246_16
Type: TC
Location: 22442 - 23005 (+)
Gene ID: k141_150246_17
Type: pfam
Location: 23187 - 24590 (+)
Gene ID: k141_150246_18
Type:
Location: 24840 - 25625 (+)
Gene ID: k141_150246_19
Type: TC
Location: 25786 - 26766 (+)
Gene ID: k141_150246_20
Type: TC
Location: 26971 - 27894 (+)
Gene ID: k141_150246_21
Type: TC
Location: 27887 - 28681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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