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Cluster: SW162_30_sub_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99248 k141_99248_11 15305 17755 - 4.A.1.1.8
NULL(UNKNOWN) k141_99248 k141_99248_12 17777 17893 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_99248 k141_99248_13 17980 18699 + GntR
TC k141_99248 k141_99248_14 19006 20322 + 3.A.1.1.45
TC k141_99248 k141_99248_15 20410 21264 + 3.A.1.1.45
TC k141_99248 k141_99248_16 21264 22103 + 3.A.1.1.45
TC k141_99248 k141_99248_17 22172 23371 + 3.A.1.1.22
CAZyme k141_99248 k141_99248_18 23828 26095 - GT35
CAZyme k141_99248 k141_99248_19 26225 27730 - GH77
Gene ID: k141_99248_11
Type: TC
Location: 15305 - 17755 (-)
Gene ID: k141_99248_12
Type:
Location: 17777 - 17893 (+)
Gene ID: k141_99248_13
Type: TF
Location: 17980 - 18699 (+)
Gene ID: k141_99248_14
Type: TC
Location: 19006 - 20322 (+)
Gene ID: k141_99248_15
Type: TC
Location: 20410 - 21264 (+)
Gene ID: k141_99248_16
Type: TC
Location: 21264 - 22103 (+)
Gene ID: k141_99248_17
Type: TC
Location: 22172 - 23371 (+)
Gene ID: k141_99248_18
Type: CAZyme
Location: 23828 - 26095 (-)
Gene ID: k141_99248_19
Type: CAZyme
Location: 26225 - 27730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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