Cluster: SW162_30_sub_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW162_30_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_101977 | k141_101977_44 | 46658 | 48058 | + | GH1 |
| TC | k141_101977 | k141_101977_45 | 48179 | 49531 | + | 4.A.3.2.2 |
| TC | k141_101977 | k141_101977_46 | 49686 | 49988 | + | 4.A.3.2.9 |
| TC | k141_101977 | k141_101977_47 | 49998 | 50330 | + | 4.A.3.2.3 |
| STP | k141_101977 | k141_101977_48 | 50572 | 51525 | + | Glucokinase |
| pfam | k141_101977 | k141_101977_49 | 51692 | 52615 | + | DHH | DHHA2 |
| TC | k141_101977 | k141_101977_50 | 52884 | 54242 | + | 2.A.33.1.1 |
Gene ID: k141_101977_44
Type: CAZyme
Location: 46658 - 48058 (+)
Type: CAZyme
Location: 46658 - 48058 (+)
Gene ID: k141_101977_45
Type: TC
Location: 48179 - 49531 (+)
Type: TC
Location: 48179 - 49531 (+)
Gene ID: k141_101977_46
Type: TC
Location: 49686 - 49988 (+)
Type: TC
Location: 49686 - 49988 (+)
Gene ID: k141_101977_47
Type: TC
Location: 49998 - 50330 (+)
Type: TC
Location: 49998 - 50330 (+)
Gene ID: k141_101977_48
Type: STP
Location: 50572 - 51525 (+)
Type: STP
Location: 50572 - 51525 (+)
Gene ID: k141_101977_49
Type: pfam
Location: 51692 - 52615 (+)
Type: pfam
Location: 51692 - 52615 (+)
Gene ID: k141_101977_50
Type: TC
Location: 52884 - 54242 (+)
Type: TC
Location: 52884 - 54242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.