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Cluster: SW162_30_sub_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_81630 k141_81630_28 39792 41468 + 3.A.1.5.35
TC k141_81630 k141_81630_29 41625 42662 + 3.A.1.5.37
TC k141_81630 k141_81630_30 42677 43612 + 3.A.1.5.11
TC k141_81630 k141_81630_31 43615 44706 + 3.A.1.5.34
TC k141_81630 k141_81630_32 44707 45735 + 3.A.1.5.36
STP k141_81630 k141_81630_33 46479 48824 + GAF | SpoIIE
STP k141_81630 k141_81630_34 48903 49649 + STAS
CAZyme k141_81630 k141_81630_35 50392 52125 + GH13_30
Gene ID: k141_81630_28
Type: TC
Location: 39792 - 41468 (+)
Gene ID: k141_81630_29
Type: TC
Location: 41625 - 42662 (+)
Gene ID: k141_81630_30
Type: TC
Location: 42677 - 43612 (+)
Gene ID: k141_81630_31
Type: TC
Location: 43615 - 44706 (+)
Gene ID: k141_81630_32
Type: TC
Location: 44707 - 45735 (+)
Gene ID: k141_81630_33
Type: STP
Location: 46479 - 48824 (+)
Gene ID: k141_81630_34
Type: STP
Location: 48903 - 49649 (+)
Gene ID: k141_81630_35
Type: CAZyme
Location: 50392 - 52125 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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