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Cluster: SW162_30_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_97360 k141_97360_12 10133 11551 - 2.A.66.2.20
CAZyme k141_97360 k141_97360_13 11628 12665 - GT2
pfam k141_97360 k141_97360_14 12668 13786 - PS_pyruv_trans
CAZyme k141_97360 k141_97360_15 13783 14880 - GT4
pfam k141_97360 k141_97360_16 14877 16001 - Acyl_transf_3
CAZyme k141_97360 k141_97360_17 15998 16792 - GT8
NULL(UNKNOWN) k141_97360 k141_97360_18 16807 18042 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_97360 k141_97360_19 18051 19445 - GT4
CAZyme k141_97360 k141_97360_20 19448 20254 - GT4
Gene ID: k141_97360_12
Type: TC
Location: 10133 - 11551 (-)
Gene ID: k141_97360_13
Type: CAZyme
Location: 11628 - 12665 (-)
Gene ID: k141_97360_14
Type: pfam
Location: 12668 - 13786 (-)
Gene ID: k141_97360_15
Type: CAZyme
Location: 13783 - 14880 (-)
Gene ID: k141_97360_16
Type: pfam
Location: 14877 - 16001 (-)
Gene ID: k141_97360_17
Type: CAZyme
Location: 15998 - 16792 (-)
Gene ID: k141_97360_18
Type:
Location: 16807 - 18042 (-)
Gene ID: k141_97360_19
Type: CAZyme
Location: 18051 - 19445 (-)
Gene ID: k141_97360_20
Type: CAZyme
Location: 19448 - 20254 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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