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Cluster: SW161_bin.52_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_23612 k141_23612_7 8203 9195 - GT2
CAZyme k141_23612 k141_23612_8 9288 10406 + GT2
pfam k141_23612 k141_23612_9 10501 11379 - Radical_SAM | Fer4_12
pfam k141_23612 k141_23612_10 11381 13717 - Gly_radical | PFL-like
CAZyme k141_23612 k141_23612_11 13754 14818 - GT2
NULL(UNKNOWN) k141_23612 k141_23612_12 14980 15765 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_23612 k141_23612_13 15799 16704 - 2.A.119.2.2
pfam k141_23612 k141_23612_14 16739 17536 - PseudoU_synth_1
TC k141_23612 k141_23612_15 17614 18372 - 3.A.1.25.4
TC k141_23612 k141_23612_16 18365 19936 - 3.A.1.26.1
Gene ID: k141_23612_7
Type: CAZyme
Location: 8203 - 9195 (-)
Gene ID: k141_23612_8
Type: CAZyme
Location: 9288 - 10406 (+)
Gene ID: k141_23612_9
Type: pfam
Location: 10501 - 11379 (-)
Gene ID: k141_23612_10
Type: pfam
Location: 11381 - 13717 (-)
Gene ID: k141_23612_11
Type: CAZyme
Location: 13754 - 14818 (-)
Gene ID: k141_23612_12
Type:
Location: 14980 - 15765 (-)
Gene ID: k141_23612_13
Type: TC
Location: 15799 - 16704 (-)
Gene ID: k141_23612_14
Type: pfam
Location: 16739 - 17536 (-)
Gene ID: k141_23612_15
Type: TC
Location: 17614 - 18372 (-)
Gene ID: k141_23612_16
Type: TC
Location: 18365 - 19936 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_23612_7 vegetarian > vegan 1.32207 0.00863

🧭 Explore Read Mapping of CGC

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