Cluster: SW149_bin.2_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SW149_bin.2
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_229987 | k141_229987_9 | 9336 | 11663 | - | 9.A.8.1.6 |
| TC | k141_229987 | k141_229987_10 | 11787 | 12008 | - | 9.A.8.1.6 |
| STP | k141_229987 | k141_229987_11 | 12046 | 12288 | - | FeoA |
| TF | k141_229987 | k141_229987_12 | 12645 | 13487 | + | HTH_6 |
| TC | k141_229987 | k141_229987_13 | 13684 | 15090 | + | 4.A.1.2.3 |
| CAZyme | k141_229987 | k141_229987_14 | 15179 | 16633 | + | GH1 |
Gene ID: k141_229987_9
Type: TC
Location: 9336 - 11663 (-)
Type: TC
Location: 9336 - 11663 (-)
Gene ID: k141_229987_10
Type: TC
Location: 11787 - 12008 (-)
Type: TC
Location: 11787 - 12008 (-)
Gene ID: k141_229987_11
Type: STP
Location: 12046 - 12288 (-)
Type: STP
Location: 12046 - 12288 (-)
Gene ID: k141_229987_12
Type: TF
Location: 12645 - 13487 (+)
Type: TF
Location: 12645 - 13487 (+)
Gene ID: k141_229987_13
Type: TC
Location: 13684 - 15090 (+)
Type: TC
Location: 13684 - 15090 (+)
Gene ID: k141_229987_14
Type: CAZyme
Location: 15179 - 16633 (+)
Type: CAZyme
Location: 15179 - 16633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.