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Cluster: SW149_bin.2_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99806 k141_99806_12 13087 13425 - 4.A.3.1.2
TF k141_99806 k141_99806_13 13641 14645 - LacI
TC k141_99806 k141_99806_14 15002 15163 + 4.A.3.1.1
TC k141_99806 k141_99806_15 15221 16777 + 4.A.3.1.1
CAZyme k141_99806 k141_99806_16 16974 18413 + GH1
TF k141_99806 k141_99806_17 18826 19836 - LacI
TC k141_99806 k141_99806_18 20112 21869 + 4.A.3.1.1
CAZyme k141_99806 k141_99806_19 21945 23366 + GH1
TF k141_99806 k141_99806_20 23561 24325 - HTH_DeoR
sulfatase k141_99806 k141_99806_21 24532 25584 + S1_4
TC k141_99806 k141_99806_22 25909 26391 - 4.A.6.1.5
pfam k141_99806 k141_99806_23 26838 27311 - DUF386
CAZyme k141_99806 k141_99806_24 27344 28513 - CE9
TF k141_99806 k141_99806_25 28657 29388 - GntR
TC k141_99806 k141_99806_26 29621 31108 - 4.A.1.1.7
Gene ID: k141_99806_12
Type: TC
Location: 13087 - 13425 (-)
Gene ID: k141_99806_13
Type: TF
Location: 13641 - 14645 (-)
Gene ID: k141_99806_14
Type: TC
Location: 15002 - 15163 (+)
Gene ID: k141_99806_15
Type: TC
Location: 15221 - 16777 (+)
Gene ID: k141_99806_16
Type: CAZyme
Location: 16974 - 18413 (+)
Gene ID: k141_99806_17
Type: TF
Location: 18826 - 19836 (-)
Gene ID: k141_99806_18
Type: TC
Location: 20112 - 21869 (+)
Gene ID: k141_99806_19
Type: CAZyme
Location: 21945 - 23366 (+)
Gene ID: k141_99806_20
Type: TF
Location: 23561 - 24325 (-)
Gene ID: k141_99806_21
Type: sulfatase
Location: 24532 - 25584 (+)
Gene ID: k141_99806_22
Type: TC
Location: 25909 - 26391 (-)
Gene ID: k141_99806_23
Type: pfam
Location: 26838 - 27311 (-)
Gene ID: k141_99806_24
Type: CAZyme
Location: 27344 - 28513 (-)
Gene ID: k141_99806_25
Type: TF
Location: 28657 - 29388 (-)
Gene ID: k141_99806_26
Type: TC
Location: 29621 - 31108 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_99806_25 vegetarian > vegan 3.37006 0.01287

🧭 Explore Read Mapping of CGC

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