Cluster: SW149_bin.2_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW149_bin.2
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_246675 | k141_246675_96 | 100239 | 101972 | - | GH13_30 |
| STP | k141_246675 | k141_246675_97 | 102713 | 103459 | - | STAS |
| STP | k141_246675 | k141_246675_98 | 103538 | 105883 | - | GAF | SpoIIE |
| TC | k141_246675 | k141_246675_99 | 106627 | 107655 | - | 3.A.1.5.36 |
| TC | k141_246675 | k141_246675_100 | 107655 | 108746 | - | 3.A.1.5.34 |
| TC | k141_246675 | k141_246675_101 | 108749 | 109684 | - | 3.A.1.5.11 |
| TC | k141_246675 | k141_246675_102 | 109699 | 110736 | - | 3.A.1.5.37 |
| TC | k141_246675 | k141_246675_103 | 110893 | 112569 | - | 3.A.1.5.35 |
Gene ID: k141_246675_96
Type: CAZyme
Location: 100239 - 101972 (-)
Type: CAZyme
Location: 100239 - 101972 (-)
Gene ID: k141_246675_97
Type: STP
Location: 102713 - 103459 (-)
Type: STP
Location: 102713 - 103459 (-)
Gene ID: k141_246675_98
Type: STP
Location: 103538 - 105883 (-)
Type: STP
Location: 103538 - 105883 (-)
Gene ID: k141_246675_99
Type: TC
Location: 106627 - 107655 (-)
Type: TC
Location: 106627 - 107655 (-)
Gene ID: k141_246675_100
Type: TC
Location: 107655 - 108746 (-)
Type: TC
Location: 107655 - 108746 (-)
Gene ID: k141_246675_101
Type: TC
Location: 108749 - 109684 (-)
Type: TC
Location: 108749 - 109684 (-)
Gene ID: k141_246675_102
Type: TC
Location: 109699 - 110736 (-)
Type: TC
Location: 109699 - 110736 (-)
Gene ID: k141_246675_103
Type: TC
Location: 110893 - 112569 (-)
Type: TC
Location: 110893 - 112569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.