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Cluster: SW147_maxbin.013_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_112101 k141_112101_7 5579 6748 - CE9
STP k141_112101 k141_112101_8 6866 8032 - SIS | SIS
TF k141_112101 k141_112101_9 8147 8878 - GntR
TC k141_112101 k141_112101_10 9064 10146 - 4.A.6.1.4
TC k141_112101 k141_112101_11 10136 10936 - 4.A.6.1.4
TC k141_112101 k141_112101_12 11027 11509 - 4.A.6.1.4
pfam k141_112101 k141_112101_13 11546 11827 - YajC
TC k141_112101 k141_112101_14 11827 12270 - 4.A.6.1.16
Gene ID: k141_112101_7
Type: CAZyme
Location: 5579 - 6748 (-)
Gene ID: k141_112101_8
Type: STP
Location: 6866 - 8032 (-)
Gene ID: k141_112101_9
Type: TF
Location: 8147 - 8878 (-)
Gene ID: k141_112101_10
Type: TC
Location: 9064 - 10146 (-)
Gene ID: k141_112101_11
Type: TC
Location: 10136 - 10936 (-)
Gene ID: k141_112101_12
Type: TC
Location: 11027 - 11509 (-)
Gene ID: k141_112101_13
Type: pfam
Location: 11546 - 11827 (-)
Gene ID: k141_112101_14
Type: TC
Location: 11827 - 12270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_112101_13 vegan > omnivore 1.04462 0.01057

🧭 Explore Read Mapping of CGC

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