Cluster: SW147_maxbin.013_CGC10
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: SW147_maxbin.013
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_95350 | k141_95350_61 | 65525 | 66901 | - | GH13_20 |
| TC | k141_95350 | k141_95350_62 | 67084 | 68280 | - | 2.A.1.2.18 |
| TC | k141_95350 | k141_95350_63 | 68402 | 70762 | - | 9.A.8.1.6 |
| peptidase | k141_95350 | k141_95350_64 | 70947 | 71849 | - | S09.UPW |
| TC | k141_95350 | k141_95350_65 | 72094 | 72657 | + | 4.A.1.2.6 |
| pfam | k141_95350 | k141_95350_66 | 72838 | 74241 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | k141_95350 | k141_95350_67 | 74491 | 75276 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_95350 | k141_95350_68 | 75437 | 76417 | + | 3.A.1.34.1 |
| TC | k141_95350 | k141_95350_69 | 76622 | 77545 | + | 3.A.1.34.1 |
| TC | k141_95350 | k141_95350_70 | 77538 | 78332 | + | 3.A.1.34.1 |
| pfam | k141_95350 | k141_95350_71 | 78405 | 80435 | + | Metallophos | 5_nucleotid_C |
| TC | k141_95350 | k141_95350_72 | 80564 | 81331 | + | 1.A.23.4.10 |
| pfam | k141_95350 | k141_95350_73 | 81425 | 83341 | + | Bmp |
| pfam | k141_95350 | k141_95350_74 | 83338 | 84048 | + | Metallophos | Metallophos_2 |
| TC | k141_95350 | k141_95350_75 | 84176 | 84883 | - | 1.C.82.1.1 |
Gene ID: k141_95350_61
Type: CAZyme
Location: 65525 - 66901 (-)
Type: CAZyme
Location: 65525 - 66901 (-)
Gene ID: k141_95350_62
Type: TC
Location: 67084 - 68280 (-)
Type: TC
Location: 67084 - 68280 (-)
Gene ID: k141_95350_63
Type: TC
Location: 68402 - 70762 (-)
Type: TC
Location: 68402 - 70762 (-)
Gene ID: k141_95350_64
Type: peptidase
Location: 70947 - 71849 (-)
Type: peptidase
Location: 70947 - 71849 (-)
Gene ID: k141_95350_65
Type: TC
Location: 72094 - 72657 (+)
Type: TC
Location: 72094 - 72657 (+)
Gene ID: k141_95350_66
Type: pfam
Location: 72838 - 74241 (+)
Type: pfam
Location: 72838 - 74241 (+)
Gene ID: k141_95350_67
Type:
Location: 74491 - 75276 (+)
Type:
Location: 74491 - 75276 (+)
Gene ID: k141_95350_68
Type: TC
Location: 75437 - 76417 (+)
Type: TC
Location: 75437 - 76417 (+)
Gene ID: k141_95350_69
Type: TC
Location: 76622 - 77545 (+)
Type: TC
Location: 76622 - 77545 (+)
Gene ID: k141_95350_70
Type: TC
Location: 77538 - 78332 (+)
Type: TC
Location: 77538 - 78332 (+)
Gene ID: k141_95350_71
Type: pfam
Location: 78405 - 80435 (+)
Type: pfam
Location: 78405 - 80435 (+)
Gene ID: k141_95350_72
Type: TC
Location: 80564 - 81331 (+)
Type: TC
Location: 80564 - 81331 (+)
Gene ID: k141_95350_73
Type: pfam
Location: 81425 - 83341 (+)
Type: pfam
Location: 81425 - 83341 (+)
Gene ID: k141_95350_74
Type: pfam
Location: 83338 - 84048 (+)
Type: pfam
Location: 83338 - 84048 (+)
Gene ID: k141_95350_75
Type: TC
Location: 84176 - 84883 (-)
Type: TC
Location: 84176 - 84883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_95350_71 | vegan > omnivore | 1.85814 | 0.01057 |
| k141_95350_71 | vegetarian > omnivore | 1.39522 | 0.03196 |