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Cluster: SW145_3_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_145615 k141_145615_70 72582 73892 + 2.A.1.4.4
TC k141_145615 k141_145615_71 74025 75416 + 2.A.1.4.1
peptidase k141_145615 k141_145615_72 75578 76582 + S33.UPW
pfam k141_145615 k141_145615_73 76734 77186 + DUF1198
TC k141_145615 k141_145615_74 77287 78477 + 2.A.1.2.26
TC k141_145615 k141_145615_75 78590 79495 - 2.A.7.3.12
pfam k141_145615 k141_145615_76 79643 81022 - LamB
TC k141_145615 k141_145615_77 81161 81466 - 4.A.3.2.1
CAZyme k141_145615 k141_145615_78 81469 82845 - GH1
TC k141_145615 k141_145615_79 82863 84188 - 4.A.3.2.6
TC k141_145615 k141_145615_80 84200 84514 - 4.A.3.2.6
TF k141_145615 k141_145615_81 84808 85758 + LacI
NULL(UNKNOWN) k141_145615 k141_145615_82 85809 86105 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_145615 k141_145615_83 86226 87590 - 2.A.6.2.19
TC k141_145615 k141_145615_84 87590 90700 - 2.A.6.2.19
TC k141_145615 k141_145615_85 90700 91821 - 2.A.6.2.19
Gene ID: k141_145615_70
Type: TC
Location: 72582 - 73892 (+)
Gene ID: k141_145615_71
Type: TC
Location: 74025 - 75416 (+)
Gene ID: k141_145615_72
Type: peptidase
Location: 75578 - 76582 (+)
Gene ID: k141_145615_73
Type: pfam
Location: 76734 - 77186 (+)
Gene ID: k141_145615_74
Type: TC
Location: 77287 - 78477 (+)
Gene ID: k141_145615_75
Type: TC
Location: 78590 - 79495 (-)
Gene ID: k141_145615_76
Type: pfam
Location: 79643 - 81022 (-)
Gene ID: k141_145615_77
Type: TC
Location: 81161 - 81466 (-)
Gene ID: k141_145615_78
Type: CAZyme
Location: 81469 - 82845 (-)
Gene ID: k141_145615_79
Type: TC
Location: 82863 - 84188 (-)
Gene ID: k141_145615_80
Type: TC
Location: 84200 - 84514 (-)
Gene ID: k141_145615_81
Type: TF
Location: 84808 - 85758 (+)
Gene ID: k141_145615_82
Type:
Location: 85809 - 86105 (-)
Gene ID: k141_145615_83
Type: TC
Location: 86226 - 87590 (-)
Gene ID: k141_145615_84
Type: TC
Location: 87590 - 90700 (-)
Gene ID: k141_145615_85
Type: TC
Location: 90700 - 91821 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_145615_72 vegetarian > omnivore 1.29560 0.03328
k141_145615_75 vegetarian > omnivore 1.06118 0.03328
k141_145615_76 vegetarian > vegan 1.63290 0.04464
k141_145615_77 vegetarian > omnivore 2.32576 0.02748
k141_145615_78 vegetarian > omnivore 1.61137 0.02748
k141_145615_79 vegetarian > omnivore 1.43090 0.03328
k141_145615_79 vegetarian > vegan 1.13962 0.04464
k141_145615_80 vegetarian > omnivore 1.79869 0.03328
k141_145615_80 vegetarian > vegan 1.10805 0.04464
k141_145615_81 vegetarian > omnivore 1.48176 0.03328
k141_145615_83 vegetarian > omnivore 1.71149 0.03328
k141_145615_83 vegetarian > vegan 1.82807 0.04464

🧭 Explore Read Mapping of CGC

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