Cluster: SW145_3_CGC66
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: SW145_3
- CGC Family ID: CGCFAM_00790
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_145615 | k141_145615_52 | 55242 | 56903 | + | 2.A.81.1.5 |
| TF | k141_145615 | k141_145615_53 | 56871 | 57617 | - | GntR |
| TC | k141_145615 | k141_145615_54 | 57839 | 59461 | + | 4.A.1.1.10 |
| CAZyme | k141_145615 | k141_145615_55 | 59458 | 60780 | + | GH4 |
| TC | k141_145615 | k141_145615_56 | 60873 | 61220 | + | 9.B.51.1.1 |
| NULL(UNKNOWN) | k141_145615 | k141_145615_57 | 61308 | 61556 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_145615 | k141_145615_58 | 61589 | 62875 | - | PALP |
| CAZyme | k141_145615 | k141_145615_59 | 62973 | 64085 | + | GH5_25 |
| TC | k141_145615 | k141_145615_60 | 63964 | 65148 | - | 2.A.1.2.9 |
| TC | k141_145615 | k141_145615_61 | 65324 | 66157 | - | 2.A.7.31.3 |
Gene ID: k141_145615_52
Type: TC
Location: 55242 - 56903 (+)
Type: TC
Location: 55242 - 56903 (+)
Gene ID: k141_145615_53
Type: TF
Location: 56871 - 57617 (-)
Type: TF
Location: 56871 - 57617 (-)
Gene ID: k141_145615_54
Type: TC
Location: 57839 - 59461 (+)
Type: TC
Location: 57839 - 59461 (+)
Gene ID: k141_145615_55
Type: CAZyme
Location: 59458 - 60780 (+)
Type: CAZyme
Location: 59458 - 60780 (+)
Gene ID: k141_145615_56
Type: TC
Location: 60873 - 61220 (+)
Type: TC
Location: 60873 - 61220 (+)
Gene ID: k141_145615_57
Type:
Location: 61308 - 61556 (+)
Type:
Location: 61308 - 61556 (+)
Gene ID: k141_145615_58
Type: STP
Location: 61589 - 62875 (-)
Type: STP
Location: 61589 - 62875 (-)
Gene ID: k141_145615_59
Type: CAZyme
Location: 62973 - 64085 (+)
Type: CAZyme
Location: 62973 - 64085 (+)
Gene ID: k141_145615_60
Type: TC
Location: 63964 - 65148 (-)
Type: TC
Location: 63964 - 65148 (-)
Gene ID: k141_145615_61
Type: TC
Location: 65324 - 66157 (-)
Type: TC
Location: 65324 - 66157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter hoffmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_145615_53 | vegetarian > vegan | 1.27199 | 0.04464 |
| k141_145615_55 | vegan > omnivore | 1.00587 | 0.01312 |
| k141_145615_56 | vegetarian > omnivore | 1.14785 | 0.03328 |
| k141_145615_56 | vegetarian > vegan | 1.27114 | 0.04464 |
| k141_145615_60 | vegetarian > omnivore | 1.06735 | 0.03328 |
| k141_145615_61 | vegetarian > omnivore | 1.30977 | 0.03328 |