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Cluster: SW145_3_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82888 k141_82888_42 42896 43705 + 3.A.1.13.1
TC k141_82888 k141_82888_43 43729 44352 + 1.A.62.2.2
pfam k141_82888 k141_82888_44 44410 44754 - Fe-S_biosyn
TC k141_82888 k141_82888_45 44840 46240 - 2.A.49.5.5
pfam k141_82888 k141_82888_46 46418 47698 + Aminotran_3
TC k141_82888 k141_82888_47 47792 49774 - 3.A.1.14.3
TC k141_82888 k141_82888_48 49771 50661 - 3.A.1.14.3
TC k141_82888 k141_82888_49 50661 51563 - 3.A.1.14.3
TC k141_82888 k141_82888_50 51509 53719 - 1.B.14.1.2
CAZyme k141_82888 k141_82888_51 53957 56482 - GT51
Gene ID: k141_82888_42
Type: TC
Location: 42896 - 43705 (+)
Gene ID: k141_82888_43
Type: TC
Location: 43729 - 44352 (+)
Gene ID: k141_82888_44
Type: pfam
Location: 44410 - 44754 (-)
Gene ID: k141_82888_45
Type: TC
Location: 44840 - 46240 (-)
Gene ID: k141_82888_46
Type: pfam
Location: 46418 - 47698 (+)
Gene ID: k141_82888_47
Type: TC
Location: 47792 - 49774 (-)
Gene ID: k141_82888_48
Type: TC
Location: 49771 - 50661 (-)
Gene ID: k141_82888_49
Type: TC
Location: 50661 - 51563 (-)
Gene ID: k141_82888_50
Type: TC
Location: 51509 - 53719 (-)
Gene ID: k141_82888_51
Type: CAZyme
Location: 53957 - 56482 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_82888_43 vegetarian > omnivore 1.17610 0.03328
k141_82888_45 vegetarian > omnivore 1.01845 0.03328
k141_82888_45 vegetarian > vegan 1.39010 0.04464

🧭 Explore Read Mapping of CGC

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