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Cluster: SW145_3_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31167 k141_31167_50 51108 52250 - GH105
TC k141_31167 k141_31167_51 52252 53835 - 2.A.2.5.2
pfam k141_31167 k141_31167_52 54097 54489 - FlhE
TC k141_31167 k141_31167_53 54489 56567 - 3.A.6.2.1
TC k141_31167 k141_31167_54 56560 57708 - 3.A.6.2.1
Gene ID: k141_31167_50
Type: CAZyme
Location: 51108 - 52250 (-)
Gene ID: k141_31167_51
Type: TC
Location: 52252 - 53835 (-)
Gene ID: k141_31167_52
Type: pfam
Location: 54097 - 54489 (-)
Gene ID: k141_31167_53
Type: TC
Location: 54489 - 56567 (-)
Gene ID: k141_31167_54
Type: TC
Location: 56560 - 57708 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31167_51 vegetarian > omnivore 2.03422 0.02641
k141_31167_51 vegetarian > vegan 1.23711 0.04464

🧭 Explore Read Mapping of CGC

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