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Cluster: SW145_3_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82458 k141_82458_74 70947 71240 - 3.A.1.27.3
TC k141_82458 k141_82458_75 71240 71875 - 3.A.1.27.3
TC k141_82458 k141_82458_76 71894 72442 - 3.A.1.27.3
TC k141_82458 k141_82458_77 72447 73229 - 3.A.1.27.3
TC k141_82458 k141_82458_78 73237 74049 - 3.A.1.27.3
TC k141_82458 k141_82458_79 74277 75254 + 2.A.19.5.1
STP k141_82458 k141_82458_80 75268 76254 + CBS | CBS | SIS
pfam k141_82458 k141_82458_81 76269 76835 + Hydrolase_3
TC k141_82458 k141_82458_82 76832 77407 + 1.B.42.1.2
TC k141_82458 k141_82458_83 77376 77930 + 1.B.42.1.2
TC k141_82458 k141_82458_84 77937 78662 + 1.B.42.1.2
pfam k141_82458 k141_82458_85 78710 80143 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_82458 k141_82458_86 80166 80453 + Ribosomal_S30AE
TC k141_82458 k141_82458_87 80536 81027 + 4.A.2.1.7
pfam k141_82458 k141_82458_88 81073 81927 + RapZ-like_N | PapZ_C
TC k141_82458 k141_82458_89 81924 82196 + 8.A.8.1.5
CAZyme k141_82458 k141_82458_90 82236 82961 - GT51
peptidase k141_82458 k141_82458_91 82958 83611 - C56.975
STP k141_82458 k141_82458_92 83844 86177 - HATPase_c | HisKA | PAS | Response_reg
TC k141_82458 k141_82458_93 86315 87397 - 1.B.42.1.2
TC k141_82458 k141_82458_94 87397 88497 - 1.B.42.1.2
Gene ID: k141_82458_74
Type: TC
Location: 70947 - 71240 (-)
Gene ID: k141_82458_75
Type: TC
Location: 71240 - 71875 (-)
Gene ID: k141_82458_76
Type: TC
Location: 71894 - 72442 (-)
Gene ID: k141_82458_77
Type: TC
Location: 72447 - 73229 (-)
Gene ID: k141_82458_78
Type: TC
Location: 73237 - 74049 (-)
Gene ID: k141_82458_79
Type: TC
Location: 74277 - 75254 (+)
Gene ID: k141_82458_80
Type: STP
Location: 75268 - 76254 (+)
Gene ID: k141_82458_81
Type: pfam
Location: 76269 - 76835 (+)
Gene ID: k141_82458_82
Type: TC
Location: 76832 - 77407 (+)
Gene ID: k141_82458_83
Type: TC
Location: 77376 - 77930 (+)
Gene ID: k141_82458_84
Type: TC
Location: 77937 - 78662 (+)
Gene ID: k141_82458_85
Type: pfam
Location: 78710 - 80143 (+)
Gene ID: k141_82458_86
Type: pfam
Location: 80166 - 80453 (+)
Gene ID: k141_82458_87
Type: TC
Location: 80536 - 81027 (+)
Gene ID: k141_82458_88
Type: pfam
Location: 81073 - 81927 (+)
Gene ID: k141_82458_89
Type: TC
Location: 81924 - 82196 (+)
Gene ID: k141_82458_90
Type: CAZyme
Location: 82236 - 82961 (-)
Gene ID: k141_82458_91
Type: peptidase
Location: 82958 - 83611 (-)
Gene ID: k141_82458_92
Type: STP
Location: 83844 - 86177 (-)
Gene ID: k141_82458_93
Type: TC
Location: 86315 - 87397 (-)
Gene ID: k141_82458_94
Type: TC
Location: 87397 - 88497 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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