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Cluster: SW145_3_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_145053 k141_145053_8 4657 5586 - 9.B.62.1.1
TC k141_145053 k141_145053_9 5591 5971 - 9.B.62.1.5
TC k141_145053 k141_145053_10 6011 6907 - 1.B.76.1.5
CAZyme k141_145053 k141_145053_11 6907 8724 - AA1
NULL(UNKNOWN) k141_145053 k141_145053_12 8959 9408 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_145053 k141_145053_13 9697 10434 + 1.A.34.1.3
pfam k141_145053 k141_145053_14 10468 10665 - DUF2933
TC k141_145053 k141_145053_15 10706 13153 - 3.A.3.5.4
pfam k141_145053 k141_145053_16 13280 13720 - DUF411
TC k141_145053 k141_145053_17 13807 16953 - 2.A.6.1.3
TC k141_145053 k141_145053_18 16964 18256 - 2.A.6.1.4
TC k141_145053 k141_145053_19 18370 18723 - 2.A.6.1.4
TC k141_145053 k141_145053_20 18752 20137 - 1.B.17.3.4
TF k141_145053 k141_145053_21 20327 21007 + Trans_reg_C
TC k141_145053 k141_145053_22 21000 22475 + 2.A.21.9.1
Gene ID: k141_145053_8
Type: TC
Location: 4657 - 5586 (-)
Gene ID: k141_145053_9
Type: TC
Location: 5591 - 5971 (-)
Gene ID: k141_145053_10
Type: TC
Location: 6011 - 6907 (-)
Gene ID: k141_145053_11
Type: CAZyme
Location: 6907 - 8724 (-)
Gene ID: k141_145053_12
Type:
Location: 8959 - 9408 (+)
Gene ID: k141_145053_13
Type: TC
Location: 9697 - 10434 (+)
Gene ID: k141_145053_14
Type: pfam
Location: 10468 - 10665 (-)
Gene ID: k141_145053_15
Type: TC
Location: 10706 - 13153 (-)
Gene ID: k141_145053_16
Type: pfam
Location: 13280 - 13720 (-)
Gene ID: k141_145053_17
Type: TC
Location: 13807 - 16953 (-)
Gene ID: k141_145053_18
Type: TC
Location: 16964 - 18256 (-)
Gene ID: k141_145053_19
Type: TC
Location: 18370 - 18723 (-)
Gene ID: k141_145053_20
Type: TC
Location: 18752 - 20137 (-)
Gene ID: k141_145053_21
Type: TF
Location: 20327 - 21007 (+)
Gene ID: k141_145053_22
Type: TC
Location: 21000 - 22475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_145053_9 vegetarian > vegan 1.16979 0.04464
k141_145053_10 vegetarian > vegan 1.48297 0.04464
k141_145053_21 vegetarian > vegan 1.11869 0.04464

🧭 Explore Read Mapping of CGC

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