Cluster: SW145_3_CGC54
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: SW145_3
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_117559 | k141_117559_27 | 24012 | 25934 | + | 1.B.22.1.1 |
| TC | k141_117559 | k141_117559_28 | 25949 | 27427 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_29 | 27427 | 28635 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_30 | 28639 | 29088 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_31 | 29088 | 29573 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_32 | 29566 | 29946 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_33 | 29943 | 30596 | + | 3.A.15.1.1 |
| TC | k141_117559 | k141_117559_34 | 30593 | 31603 | + | 3.A.15.1.1 |
| pfam | k141_117559 | k141_117559_35 | 31619 | 32752 | + | T2SSL | GspL_C |
| pfam | k141_117559 | k141_117559_36 | 32749 | 33234 | + | T2SSM |
| TC | k141_117559 | k141_117559_37 | 33231 | 34028 | + | 3.A.15.2.1 |
| CAZyme | k141_117559 | k141_117559_38 | 34282 | 36984 | + | GH18 |
| CAZyme | k141_117559 | k141_117559_39 | 37087 | 37527 | + | GH23 |
| CAZyme | k141_117559 | k141_117559_40 | 37662 | 39488 | + | CBM73 | GH19 |
Gene ID: k141_117559_27
Type: TC
Location: 24012 - 25934 (+)
Type: TC
Location: 24012 - 25934 (+)
Gene ID: k141_117559_28
Type: TC
Location: 25949 - 27427 (+)
Type: TC
Location: 25949 - 27427 (+)
Gene ID: k141_117559_29
Type: TC
Location: 27427 - 28635 (+)
Type: TC
Location: 27427 - 28635 (+)
Gene ID: k141_117559_30
Type: TC
Location: 28639 - 29088 (+)
Type: TC
Location: 28639 - 29088 (+)
Gene ID: k141_117559_31
Type: TC
Location: 29088 - 29573 (+)
Type: TC
Location: 29088 - 29573 (+)
Gene ID: k141_117559_32
Type: TC
Location: 29566 - 29946 (+)
Type: TC
Location: 29566 - 29946 (+)
Gene ID: k141_117559_33
Type: TC
Location: 29943 - 30596 (+)
Type: TC
Location: 29943 - 30596 (+)
Gene ID: k141_117559_34
Type: TC
Location: 30593 - 31603 (+)
Type: TC
Location: 30593 - 31603 (+)
Gene ID: k141_117559_35
Type: pfam
Location: 31619 - 32752 (+)
Type: pfam
Location: 31619 - 32752 (+)
Gene ID: k141_117559_36
Type: pfam
Location: 32749 - 33234 (+)
Type: pfam
Location: 32749 - 33234 (+)
Gene ID: k141_117559_37
Type: TC
Location: 33231 - 34028 (+)
Type: TC
Location: 33231 - 34028 (+)
Gene ID: k141_117559_38
Type: CAZyme
Location: 34282 - 36984 (+)
Type: CAZyme
Location: 34282 - 36984 (+)
Gene ID: k141_117559_39
Type: CAZyme
Location: 37087 - 37527 (+)
Type: CAZyme
Location: 37087 - 37527 (+)
Gene ID: k141_117559_40
Type: CAZyme
Location: 37662 - 39488 (+)
Type: CAZyme
Location: 37662 - 39488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter hoffmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_117559_27 | vegetarian > omnivore | 1.19072 | 0.03328 |
| k141_117559_29 | vegetarian > omnivore | 1.57913 | 0.03328 |
| k141_117559_30 | vegetarian > omnivore | 1.48198 | 0.03328 |
| k141_117559_31 | vegetarian > omnivore | 2.55729 | 0.03328 |
| k141_117559_32 | vegetarian > omnivore | 1.96387 | 0.03328 |
| k141_117559_34 | vegetarian > omnivore | 2.55781 | 0.03328 |
| k141_117559_37 | vegetarian > omnivore | 1.33935 | 0.03328 |
| k141_117559_37 | vegetarian > vegan | 1.02303 | 0.04464 |
| k141_117559_38 | vegetarian > omnivore | 1.25008 | 0.03328 |
| k141_117559_39 | vegetarian > omnivore | 1.22330 | 0.03328 |
| k141_117559_40 | vegetarian > omnivore | 1.51304 | 0.03328 |