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Cluster: SW145_3_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14340 k141_14340_14 12777 14786 - 5.A.1.5.1
NULL(UNKNOWN) k141_14340 k141_14340_15 14835 15194 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_14340 k141_14340_16 15319 16752 - GH1
TF k141_14340 k141_14340_17 16869 17600 - HTH_6
TC k141_14340 k141_14340_18 17867 18526 + 1.C.113.1.10
Gene ID: k141_14340_14
Type: TC
Location: 12777 - 14786 (-)
Gene ID: k141_14340_15
Type:
Location: 14835 - 15194 (-)
Gene ID: k141_14340_16
Type: CAZyme
Location: 15319 - 16752 (-)
Gene ID: k141_14340_17
Type: TF
Location: 16869 - 17600 (-)
Gene ID: k141_14340_18
Type: TC
Location: 17867 - 18526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_14340_14 vegetarian > omnivore 1.82068 0.03328
k141_14340_14 vegetarian > vegan 1.81336 0.04464
k141_14340_15 vegetarian > omnivore 2.37826 0.03328
k141_14340_15 vegetarian > vegan 2.22473 0.04464
k141_14340_16 vegan > omnivore 1.57126 0.00364
k141_14340_17 vegetarian > vegan 1.71563 0.03528

🧭 Explore Read Mapping of CGC

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