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Cluster: SW145_3_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149184 k141_149184_2 960 1790 - 9.B.104.1.1
STP k141_149184 k141_149184_3 1838 2170 - Rhodanese
pfam k141_149184 k141_149184_4 2456 3964 + DAO | DAO_C
CAZyme k141_149184 k141_149184_5 4055 6502 - GT35
CAZyme k141_149184 k141_149184_6 6521 7954 - GT5
pfam k141_149184 k141_149184_7 7954 9249 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_149184 k141_149184_8 9267 11240 - GH13_11
CAZyme k141_149184 k141_149184_9 11237 13423 - CBM48 | GH13_9
pfam k141_149184 k141_149184_10 13663 14766 - Semialdhyde_dh | Semialdhyde_dhC
TC k141_149184 k141_149184_11 14945 15538 + 2.A.95.1.5
TC k141_149184 k141_149184_12 15644 16909 - 2.A.8.1.8
Gene ID: k141_149184_2
Type: TC
Location: 960 - 1790 (-)
Gene ID: k141_149184_3
Type: STP
Location: 1838 - 2170 (-)
Gene ID: k141_149184_4
Type: pfam
Location: 2456 - 3964 (+)
Gene ID: k141_149184_5
Type: CAZyme
Location: 4055 - 6502 (-)
Gene ID: k141_149184_6
Type: CAZyme
Location: 6521 - 7954 (-)
Gene ID: k141_149184_7
Type: pfam
Location: 7954 - 9249 (-)
Gene ID: k141_149184_8
Type: CAZyme
Location: 9267 - 11240 (-)
Gene ID: k141_149184_9
Type: CAZyme
Location: 11237 - 13423 (-)
Gene ID: k141_149184_10
Type: pfam
Location: 13663 - 14766 (-)
Gene ID: k141_149184_11
Type: TC
Location: 14945 - 15538 (+)
Gene ID: k141_149184_12
Type: TC
Location: 15644 - 16909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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