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Cluster: SW145_3_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_94832 k141_94832_8 7279 8025 - GT2
NULL(UNKNOWN) k141_94832 k141_94832_9 8042 9262 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_94832 k141_94832_10 9237 10454 - GT4
pfam k141_94832 k141_94832_11 10451 10942 - Hexapep
CAZyme k141_94832 k141_94832_12 10942 11784 - GT2
TC k141_94832 k141_94832_13 11907 14069 - 8.A.3.3.2
pfam k141_94832 k141_94832_14 14072 14515 - LMWPc
TC k141_94832 k141_94832_15 14522 15658 - 1.B.18.3.1
TC k141_94832 k141_94832_16 16352 17935 + 2.A.109.2.3
TC k141_94832 k141_94832_17 18026 19876 - 9.B.22.2.1
pfam k141_94832 k141_94832_18 19900 20481 - DCD_N | DCD
pfam k141_94832 k141_94832_19 20573 21214 - PRK
TC k141_94832 k141_94832_20 21557 24886 + 9.B.34.1.1
Gene ID: k141_94832_8
Type: CAZyme
Location: 7279 - 8025 (-)
Gene ID: k141_94832_9
Type:
Location: 8042 - 9262 (-)
Gene ID: k141_94832_10
Type: CAZyme
Location: 9237 - 10454 (-)
Gene ID: k141_94832_11
Type: pfam
Location: 10451 - 10942 (-)
Gene ID: k141_94832_12
Type: CAZyme
Location: 10942 - 11784 (-)
Gene ID: k141_94832_13
Type: TC
Location: 11907 - 14069 (-)
Gene ID: k141_94832_14
Type: pfam
Location: 14072 - 14515 (-)
Gene ID: k141_94832_15
Type: TC
Location: 14522 - 15658 (-)
Gene ID: k141_94832_16
Type: TC
Location: 16352 - 17935 (+)
Gene ID: k141_94832_17
Type: TC
Location: 18026 - 19876 (-)
Gene ID: k141_94832_18
Type: pfam
Location: 19900 - 20481 (-)
Gene ID: k141_94832_19
Type: pfam
Location: 20573 - 21214 (-)
Gene ID: k141_94832_20
Type: TC
Location: 21557 - 24886 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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