Cluster: SW145_3_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SW145_3
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_84385 | k141_84385_20 | 23903 | 25339 | + | 2.A.1.3.38 |
| TC | k141_84385 | k141_84385_21 | 25407 | 26651 | + | 1.A.23.4.5 |
| TF | k141_84385 | k141_84385_22 | 26652 | 27623 | - | LacI |
| CAZyme | k141_84385 | k141_84385_23 | 27699 | 28865 | - | GH109 |
| pfam | k141_84385 | k141_84385_24 | 28834 | 29859 | - | AP_endonuc_2 |
| TC | k141_84385 | k141_84385_25 | 29875 | 31110 | - | 2.A.1.10.4 |
| TC | k141_84385 | k141_84385_26 | 31442 | 32827 | - | 2.A.3.1.1 |
| pfam | k141_84385 | k141_84385_27 | 32930 | 34903 | - | PhoX |
| TC | k141_84385 | k141_84385_28 | 35031 | 37214 | - | 1.B.14.1.15 |
Gene ID: k141_84385_20
Type: TC
Location: 23903 - 25339 (+)
Type: TC
Location: 23903 - 25339 (+)
Gene ID: k141_84385_21
Type: TC
Location: 25407 - 26651 (+)
Type: TC
Location: 25407 - 26651 (+)
Gene ID: k141_84385_22
Type: TF
Location: 26652 - 27623 (-)
Type: TF
Location: 26652 - 27623 (-)
Gene ID: k141_84385_23
Type: CAZyme
Location: 27699 - 28865 (-)
Type: CAZyme
Location: 27699 - 28865 (-)
Gene ID: k141_84385_24
Type: pfam
Location: 28834 - 29859 (-)
Type: pfam
Location: 28834 - 29859 (-)
Gene ID: k141_84385_25
Type: TC
Location: 29875 - 31110 (-)
Type: TC
Location: 29875 - 31110 (-)
Gene ID: k141_84385_26
Type: TC
Location: 31442 - 32827 (-)
Type: TC
Location: 31442 - 32827 (-)
Gene ID: k141_84385_27
Type: pfam
Location: 32930 - 34903 (-)
Type: pfam
Location: 32930 - 34903 (-)
Gene ID: k141_84385_28
Type: TC
Location: 35031 - 37214 (-)
Type: TC
Location: 35031 - 37214 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter hoffmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_84385_20 | vegetarian > omnivore | 2.56073 | 0.03328 |
| k141_84385_22 | vegetarian > omnivore | 1.20881 | 0.03328 |
| k141_84385_25 | vegetarian > omnivore | 1.07432 | 0.03328 |
| k141_84385_27 | vegetarian > omnivore | 1.59202 | 0.03328 |
| k141_84385_27 | vegetarian > vegan | 1.59445 | 0.04464 |
| k141_84385_28 | vegetarian > omnivore | 2.11583 | 0.02641 |
| k141_84385_28 | vegetarian > vegan | 1.07623 | 0.04464 |