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Cluster: SW144_bin.95_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_37037 k141_37037_11 7988 9667 + GH18
TC k141_37037 k141_37037_12 9998 11437 - 2.A.38.1.1
TC k141_37037 k141_37037_13 11452 12807 - 2.A.38.1.1
pfam k141_37037 k141_37037_14 12987 13901 + MS_channel_2nd | MS_channel_1st_1 | MS_channel_3rd
TC k141_37037 k141_37037_15 14035 14586 + 3.A.1.25.5
Gene ID: k141_37037_11
Type: CAZyme
Location: 7988 - 9667 (+)
Gene ID: k141_37037_12
Type: TC
Location: 9998 - 11437 (-)
Gene ID: k141_37037_13
Type: TC
Location: 11452 - 12807 (-)
Gene ID: k141_37037_14
Type: pfam
Location: 12987 - 13901 (+)
Gene ID: k141_37037_15
Type: TC
Location: 14035 - 14586 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_37037_12 vegan > omnivore 1.12788 0.00918

🧭 Explore Read Mapping of CGC

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