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Cluster: SW144_bin.95_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_239845 k141_239845_2 429 2171 - 3.A.1.1.9
TC k141_239845 k141_239845_3 2168 3877 - 9.B.33.1.1
TF k141_239845 k141_239845_4 3840 5399 - HTH_AraC
TC k141_239845 k141_239845_5 5547 6383 - 3.A.1.1.45
TC k141_239845 k141_239845_6 6383 7225 - 3.A.1.1.45
TC k141_239845 k141_239845_7 7395 8732 - 3.A.1.1.45
NULL(UNKNOWN) k141_239845 k141_239845_8 9028 9396 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_239845 k141_239845_9 9639 11357 - GH2
TF k141_239845 k141_239845_10 11504 12346 + HTH_AraC
TC k141_239845 k141_239845_11 12763 13923 - 2.A.39.1.3
Gene ID: k141_239845_2
Type: TC
Location: 429 - 2171 (-)
Gene ID: k141_239845_3
Type: TC
Location: 2168 - 3877 (-)
Gene ID: k141_239845_4
Type: TF
Location: 3840 - 5399 (-)
Gene ID: k141_239845_5
Type: TC
Location: 5547 - 6383 (-)
Gene ID: k141_239845_6
Type: TC
Location: 6383 - 7225 (-)
Gene ID: k141_239845_7
Type: TC
Location: 7395 - 8732 (-)
Gene ID: k141_239845_8
Type:
Location: 9028 - 9396 (+)
Gene ID: k141_239845_9
Type: CAZyme
Location: 9639 - 11357 (-)
Gene ID: k141_239845_10
Type: TF
Location: 11504 - 12346 (+)
Gene ID: k141_239845_11
Type: TC
Location: 12763 - 13923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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