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Cluster: SW144_bin.95_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_260621 k141_260621_12 14293 14697 - 2.A.115.2.14
CAZyme k141_260621 k141_260621_13 15177 16367 - GH172
TF k141_260621 k141_260621_14 16414 17463 - LacI
pfam k141_260621 k141_260621_15 17486 19966 - Bac_rhamnosid6H | MGH1-like_GH
TC k141_260621 k141_260621_16 19979 20785 - 3.A.1.1.36
TC k141_260621 k141_260621_17 20790 21683 - 3.A.1.1.20
STP k141_260621 k141_260621_18 21704 22948 - SBP_bac_1
CAZyme k141_260621 k141_260621_19 22988 24340 - GH172
Gene ID: k141_260621_12
Type: TC
Location: 14293 - 14697 (-)
Gene ID: k141_260621_13
Type: CAZyme
Location: 15177 - 16367 (-)
Gene ID: k141_260621_14
Type: TF
Location: 16414 - 17463 (-)
Gene ID: k141_260621_15
Type: pfam
Location: 17486 - 19966 (-)
Gene ID: k141_260621_16
Type: TC
Location: 19979 - 20785 (-)
Gene ID: k141_260621_17
Type: TC
Location: 20790 - 21683 (-)
Gene ID: k141_260621_18
Type: STP
Location: 21704 - 22948 (-)
Gene ID: k141_260621_19
Type: CAZyme
Location: 22988 - 24340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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