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Cluster: SW144_bin.95_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_186802 k141_186802_1 400 1800 - 2.A.2.3.3
CAZyme k141_186802 k141_186802_2 1898 4645 - CBM67 | GH78
CAZyme k141_186802 k141_186802_3 4723 7362 - GH3
TF k141_186802 k141_186802_4 7593 8792 + HTH_AraC | HTH_AraC
CAZyme k141_186802 k141_186802_5 8814 11291 - GH2
TF k141_186802 k141_186802_6 11549 12004 + MarR
TC k141_186802 k141_186802_7 12026 13393 + 2.A.66.1.32
CAZyme k141_186802 k141_186802_8 13505 15802 - GH3
Gene ID: k141_186802_1
Type: TC
Location: 400 - 1800 (-)
Gene ID: k141_186802_2
Type: CAZyme
Location: 1898 - 4645 (-)
Gene ID: k141_186802_3
Type: CAZyme
Location: 4723 - 7362 (-)
Gene ID: k141_186802_4
Type: TF
Location: 7593 - 8792 (+)
Gene ID: k141_186802_5
Type: CAZyme
Location: 8814 - 11291 (-)
Gene ID: k141_186802_6
Type: TF
Location: 11549 - 12004 (+)
Gene ID: k141_186802_7
Type: TC
Location: 12026 - 13393 (+)
Gene ID: k141_186802_8
Type: CAZyme
Location: 13505 - 15802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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