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Cluster: SW144_bin.95_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_94667 k141_94667_61 48227 49651 + GH25
TC k141_94667 k141_94667_62 50061 50753 + 3.A.1.140.1
pfam k141_94667 k141_94667_63 50743 51648 + FtsX | FtsX_ECD
TC k141_94667 k141_94667_64 51740 52915 + 9.B.174.1.2
NULL(UNKNOWN) k141_94667 k141_94667_65 53014 54318 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_94667 k141_94667_66 54379 55347 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_94667 k141_94667_67 55366 57516 - 2.A.53.1.4
TC k141_94667 k141_94667_68 57691 58785 + 9.B.97.6.2
TC k141_94667 k141_94667_69 58955 60763 + 2.A.58.2.2
TC k141_94667 k141_94667_70 61000 62451 + 2.A.25.1.4
Gene ID: k141_94667_61
Type: CAZyme
Location: 48227 - 49651 (+)
Gene ID: k141_94667_62
Type: TC
Location: 50061 - 50753 (+)
Gene ID: k141_94667_63
Type: pfam
Location: 50743 - 51648 (+)
Gene ID: k141_94667_64
Type: TC
Location: 51740 - 52915 (+)
Gene ID: k141_94667_65
Type:
Location: 53014 - 54318 (+)
Gene ID: k141_94667_66
Type:
Location: 54379 - 55347 (+)
Gene ID: k141_94667_67
Type: TC
Location: 55366 - 57516 (-)
Gene ID: k141_94667_68
Type: TC
Location: 57691 - 58785 (+)
Gene ID: k141_94667_69
Type: TC
Location: 58955 - 60763 (+)
Gene ID: k141_94667_70
Type: TC
Location: 61000 - 62451 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_94667_63 vegan > omnivore 1.02295 0.00945

🧭 Explore Read Mapping of CGC

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