dbCAN Logo

Cluster: SW141_bin.60_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174172 k141_174172_540 542162 542899 + 1.A.8.2.6
TC k141_174172 k141_174172_541 543095 544588 + 4.A.2.1.6
TC k141_174172 k141_174172_542 544603 545055 + 4.A.2.1.8
CAZyme k141_174172 k141_174172_543 545113 547731 + GH38
TF k141_174172 k141_174172_544 547741 548538 + HTH_6
CAZyme k141_174172 k141_174172_545 548551 549930 + GH1
pfam k141_174172 k141_174172_546 549920 550804 + ROK
pfam k141_174172 k141_174172_547 550866 551207 + DUF2200
TC k141_174172 k141_174172_548 551588 554263 + 3.A.3.2.21
Gene ID: k141_174172_540
Type: TC
Location: 542162 - 542899 (+)
Gene ID: k141_174172_541
Type: TC
Location: 543095 - 544588 (+)
Gene ID: k141_174172_542
Type: TC
Location: 544603 - 545055 (+)
Gene ID: k141_174172_543
Type: CAZyme
Location: 545113 - 547731 (+)
Gene ID: k141_174172_544
Type: TF
Location: 547741 - 548538 (+)
Gene ID: k141_174172_545
Type: CAZyme
Location: 548551 - 549930 (+)
Gene ID: k141_174172_546
Type: pfam
Location: 549920 - 550804 (+)
Gene ID: k141_174172_547
Type: pfam
Location: 550866 - 551207 (+)
Gene ID: k141_174172_548
Type: TC
Location: 551588 - 554263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List