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Cluster: SW137_maxbin.003_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_282800 k141_282800_2 1644 1982 - 4.A.3.1.2
TF k141_282800 k141_282800_3 2197 3201 - LacI
TC k141_282800 k141_282800_4 3559 5334 + 4.A.3.1.1
NULL(UNKNOWN) k141_282800 k141_282800_5 5344 5499 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_282800 k141_282800_6 5531 6970 + GH1
TF k141_282800 k141_282800_7 7232 8269 - LacI
CAZyme k141_282800 k141_282800_8 8611 10053 + GH1
TC k141_282800 k141_282800_9 10230 11990 + 4.A.3.1.1
TF k141_282800 k141_282800_10 12244 13245 - LacI
TC k141_282800 k141_282800_11 13530 15317 + 4.A.3.1.1
CAZyme k141_282800 k141_282800_12 15394 16815 + GH1
Gene ID: k141_282800_2
Type: TC
Location: 1644 - 1982 (-)
Gene ID: k141_282800_3
Type: TF
Location: 2197 - 3201 (-)
Gene ID: k141_282800_4
Type: TC
Location: 3559 - 5334 (+)
Gene ID: k141_282800_5
Type:
Location: 5344 - 5499 (-)
Gene ID: k141_282800_6
Type: CAZyme
Location: 5531 - 6970 (+)
Gene ID: k141_282800_7
Type: TF
Location: 7232 - 8269 (-)
Gene ID: k141_282800_8
Type: CAZyme
Location: 8611 - 10053 (+)
Gene ID: k141_282800_9
Type: TC
Location: 10230 - 11990 (+)
Gene ID: k141_282800_10
Type: TF
Location: 12244 - 13245 (-)
Gene ID: k141_282800_11
Type: TC
Location: 13530 - 15317 (+)
Gene ID: k141_282800_12
Type: CAZyme
Location: 15394 - 16815 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_282800_7 vegetarian > omnivore 1.05145 0.02677

🧭 Explore Read Mapping of CGC

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