Cluster: SW136_maxbin.006_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW136_maxbin.006
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20035 | k141_20035_34 | 34181 | 34624 | + | 4.A.6.1.16 |
| pfam | k141_20035 | k141_20035_35 | 34624 | 34905 | + | YajC |
| TC | k141_20035 | k141_20035_36 | 34942 | 35424 | + | 4.A.6.1.4 |
| TC | k141_20035 | k141_20035_37 | 35515 | 36315 | + | 4.A.6.1.4 |
| TC | k141_20035 | k141_20035_38 | 36305 | 37387 | + | 4.A.6.1.4 |
| TF | k141_20035 | k141_20035_39 | 37573 | 38304 | + | GntR |
| STP | k141_20035 | k141_20035_40 | 38419 | 39585 | + | SIS | SIS |
| CAZyme | k141_20035 | k141_20035_41 | 39704 | 40873 | + | CE9 |
Gene ID: k141_20035_34
Type: TC
Location: 34181 - 34624 (+)
Type: TC
Location: 34181 - 34624 (+)
Gene ID: k141_20035_35
Type: pfam
Location: 34624 - 34905 (+)
Type: pfam
Location: 34624 - 34905 (+)
Gene ID: k141_20035_36
Type: TC
Location: 34942 - 35424 (+)
Type: TC
Location: 34942 - 35424 (+)
Gene ID: k141_20035_37
Type: TC
Location: 35515 - 36315 (+)
Type: TC
Location: 35515 - 36315 (+)
Gene ID: k141_20035_38
Type: TC
Location: 36305 - 37387 (+)
Type: TC
Location: 36305 - 37387 (+)
Gene ID: k141_20035_39
Type: TF
Location: 37573 - 38304 (+)
Type: TF
Location: 37573 - 38304 (+)
Gene ID: k141_20035_40
Type: STP
Location: 38419 - 39585 (+)
Type: STP
Location: 38419 - 39585 (+)
Gene ID: k141_20035_41
Type: CAZyme
Location: 39704 - 40873 (+)
Type: CAZyme
Location: 39704 - 40873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_20035_35 | vegan > omnivore | 1.00833 | 0.00701 |