Cluster: SW136_maxbin.006_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW136_maxbin.006
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_111380 | k141_111380_136 | 138821 | 139747 | - | CE7 |
| TC | k141_111380 | k141_111380_137 | 139879 | 140706 | - | 3.A.1.5.27 |
| TC | k141_111380 | k141_111380_138 | 140707 | 142722 | - | 3.A.1.5.25 |
| TC | k141_111380 | k141_111380_139 | 142726 | 143682 | - | 3.A.1.5.38 |
| TC | k141_111380 | k141_111380_140 | 143838 | 145451 | - | 3.A.1.5.27 |
| pfam | k141_111380 | k141_111380_141 | 145817 | 147757 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_111380 | k141_111380_142 | 147764 | 149446 | - | 2.A.66.4.4 |
Gene ID: k141_111380_136
Type: CAZyme
Location: 138821 - 139747 (-)
Type: CAZyme
Location: 138821 - 139747 (-)
Gene ID: k141_111380_137
Type: TC
Location: 139879 - 140706 (-)
Type: TC
Location: 139879 - 140706 (-)
Gene ID: k141_111380_138
Type: TC
Location: 140707 - 142722 (-)
Type: TC
Location: 140707 - 142722 (-)
Gene ID: k141_111380_139
Type: TC
Location: 142726 - 143682 (-)
Type: TC
Location: 142726 - 143682 (-)
Gene ID: k141_111380_140
Type: TC
Location: 143838 - 145451 (-)
Type: TC
Location: 143838 - 145451 (-)
Gene ID: k141_111380_141
Type: pfam
Location: 145817 - 147757 (-)
Type: pfam
Location: 145817 - 147757 (-)
Gene ID: k141_111380_142
Type: TC
Location: 147764 - 149446 (-)
Type: TC
Location: 147764 - 149446 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.