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Cluster: SW134_30_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_125435 k141_125435_117 114430 115950 - 2.A.40.1.4
pfam k141_125435 k141_125435_118 116206 117342 - ROK
CAZyme k141_125435 k141_125435_119 117384 119921 - GH94
pfam k141_125435 k141_125435_120 119943 121352 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_125435 k141_125435_121 121390 126057 - GH16
pfam k141_125435 k141_125435_122 126136 128250 - Glug
TC k141_125435 k141_125435_123 128272 129192 - 3.A.1.1.18
TC k141_125435 k141_125435_124 129203 130207 - 3.A.1.1.6
Gene ID: k141_125435_117
Type: TC
Location: 114430 - 115950 (-)
Gene ID: k141_125435_118
Type: pfam
Location: 116206 - 117342 (-)
Gene ID: k141_125435_119
Type: CAZyme
Location: 117384 - 119921 (-)
Gene ID: k141_125435_120
Type: pfam
Location: 119943 - 121352 (-)
Gene ID: k141_125435_121
Type: CAZyme
Location: 121390 - 126057 (-)
Gene ID: k141_125435_122
Type: pfam
Location: 126136 - 128250 (-)
Gene ID: k141_125435_123
Type: TC
Location: 128272 - 129192 (-)
Gene ID: k141_125435_124
Type: TC
Location: 129203 - 130207 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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