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Cluster: SW134_30_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_197248 k141_197248_2 1249 2118 + 3.A.1.1.25
NULL(UNKNOWN) k141_197248 k141_197248_3 2120 3916 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_197248 k141_197248_4 3928 5844 + GH163
CAZyme k141_197248 k141_197248_5 5844 7886 + GH36
pfam k141_197248 k141_197248_6 7887 8807 + BcrAD_BadFG
STP k141_197248 k141_197248_7 8804 10321 + SIS
CAZyme k141_197248 k141_197248_8 10260 12416 + GH42
Gene ID: k141_197248_2
Type: TC
Location: 1249 - 2118 (+)
Gene ID: k141_197248_3
Type:
Location: 2120 - 3916 (+)
Gene ID: k141_197248_4
Type: CAZyme
Location: 3928 - 5844 (+)
Gene ID: k141_197248_5
Type: CAZyme
Location: 5844 - 7886 (+)
Gene ID: k141_197248_6
Type: pfam
Location: 7887 - 8807 (+)
Gene ID: k141_197248_7
Type: STP
Location: 8804 - 10321 (+)
Gene ID: k141_197248_8
Type: CAZyme
Location: 10260 - 12416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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