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Cluster: SW134_30_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9618 k141_9618_16 9941 11521 + 2.A.66.1.28
pfam k141_9618 k141_9618_17 11873 15163 + Big_2
TC k141_9618 k141_9618_18 15178 16542 + 3.A.1.1.21
TC k141_9618 k141_9618_19 16623 17525 + 3.A.1.1.34
TC k141_9618 k141_9618_20 17527 18381 + 3.A.1.1.20
CAZyme k141_9618 k141_9618_21 18402 20993 + GH172
CAZyme k141_9618 k141_9618_22 21019 23418 + GH172
CAZyme k141_9618 k141_9618_23 23439 24536 + GH172
Gene ID: k141_9618_16
Type: TC
Location: 9941 - 11521 (+)
Gene ID: k141_9618_17
Type: pfam
Location: 11873 - 15163 (+)
Gene ID: k141_9618_18
Type: TC
Location: 15178 - 16542 (+)
Gene ID: k141_9618_19
Type: TC
Location: 16623 - 17525 (+)
Gene ID: k141_9618_20
Type: TC
Location: 17527 - 18381 (+)
Gene ID: k141_9618_21
Type: CAZyme
Location: 18402 - 20993 (+)
Gene ID: k141_9618_22
Type: CAZyme
Location: 21019 - 23418 (+)
Gene ID: k141_9618_23
Type: CAZyme
Location: 23439 - 24536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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