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Cluster: SW134_30_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_195037 k141_195037_54 55522 57816 - GH94
NULL(UNKNOWN) k141_195037 k141_195037_55 58007 58480 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_195037 k141_195037_56 58511 59827 - 3.A.5.1.1
NULL(UNKNOWN) k141_195037 k141_195037_57 59851 60405 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_195037 k141_195037_58 60504 60896 - Sigma70_r4
TC k141_195037 k141_195037_59 60898 61791 - 3.A.5.1.1
Gene ID: k141_195037_54
Type: CAZyme
Location: 55522 - 57816 (-)
Gene ID: k141_195037_55
Type:
Location: 58007 - 58480 (-)
Gene ID: k141_195037_56
Type: TC
Location: 58511 - 59827 (-)
Gene ID: k141_195037_57
Type:
Location: 59851 - 60405 (-)
Gene ID: k141_195037_58
Type: STP
Location: 60504 - 60896 (-)
Gene ID: k141_195037_59
Type: TC
Location: 60898 - 61791 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_195037_59 vegetarian > vegan 1.73662 0.00498

🧭 Explore Read Mapping of CGC

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