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Cluster: SW134_30_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_33596 k141_33596_16 16155 17606 + GH16
CAZyme k141_33596 k141_33596_17 17715 19016 + GH16
STP k141_33596 k141_33596_18 19057 20655 + SBP_bac_1
pfam k141_33596 k141_33596_19 20703 21647 + BPD_transp_1
TC k141_33596 k141_33596_20 21647 22663 + 3.A.1.1.47
pfam k141_33596 k141_33596_21 22702 27090 + Big_2
CAZyme k141_33596 k141_33596_22 27227 29143 + GH20
CAZyme k141_33596 k141_33596_23 29140 30273 + CE9
pfam k141_33596 k141_33596_24 30336 31778 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_33596 k141_33596_25 31744 34269 + GH94
Gene ID: k141_33596_16
Type: CAZyme
Location: 16155 - 17606 (+)
Gene ID: k141_33596_17
Type: CAZyme
Location: 17715 - 19016 (+)
Gene ID: k141_33596_18
Type: STP
Location: 19057 - 20655 (+)
Gene ID: k141_33596_19
Type: pfam
Location: 20703 - 21647 (+)
Gene ID: k141_33596_20
Type: TC
Location: 21647 - 22663 (+)
Gene ID: k141_33596_21
Type: pfam
Location: 22702 - 27090 (+)
Gene ID: k141_33596_22
Type: CAZyme
Location: 27227 - 29143 (+)
Gene ID: k141_33596_23
Type: CAZyme
Location: 29140 - 30273 (+)
Gene ID: k141_33596_24
Type: pfam
Location: 30336 - 31778 (+)
Gene ID: k141_33596_25
Type: CAZyme
Location: 31744 - 34269 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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