Cluster: SW130_bin.11_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW130_bin.11
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70856 | k141_70856_29 | 28855 | 29298 | + | 4.A.6.1.16 |
| pfam | k141_70856 | k141_70856_30 | 29298 | 29579 | + | YajC |
| TC | k141_70856 | k141_70856_31 | 29616 | 30098 | + | 4.A.6.1.4 |
| TC | k141_70856 | k141_70856_32 | 30189 | 30989 | + | 4.A.6.1.4 |
| TC | k141_70856 | k141_70856_33 | 30979 | 32061 | + | 4.A.6.1.4 |
| TF | k141_70856 | k141_70856_34 | 32247 | 32978 | + | GntR |
| STP | k141_70856 | k141_70856_35 | 33093 | 34259 | + | SIS | SIS |
| CAZyme | k141_70856 | k141_70856_36 | 34377 | 35546 | + | CE9 |
Gene ID: k141_70856_29
Type: TC
Location: 28855 - 29298 (+)
Type: TC
Location: 28855 - 29298 (+)
Gene ID: k141_70856_30
Type: pfam
Location: 29298 - 29579 (+)
Type: pfam
Location: 29298 - 29579 (+)
Gene ID: k141_70856_31
Type: TC
Location: 29616 - 30098 (+)
Type: TC
Location: 29616 - 30098 (+)
Gene ID: k141_70856_32
Type: TC
Location: 30189 - 30989 (+)
Type: TC
Location: 30189 - 30989 (+)
Gene ID: k141_70856_33
Type: TC
Location: 30979 - 32061 (+)
Type: TC
Location: 30979 - 32061 (+)
Gene ID: k141_70856_34
Type: TF
Location: 32247 - 32978 (+)
Type: TF
Location: 32247 - 32978 (+)
Gene ID: k141_70856_35
Type: STP
Location: 33093 - 34259 (+)
Type: STP
Location: 33093 - 34259 (+)
Gene ID: k141_70856_36
Type: CAZyme
Location: 34377 - 35546 (+)
Type: CAZyme
Location: 34377 - 35546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_70856_30 | vegan > omnivore | 1.04864 | 0.00701 |