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Cluster: SW127_40_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_141329 k141_141329_89 89193 91232 + 3.A.15.4.1
TC k141_141329 k141_141329_90 91234 92730 + 3.A.15.4.1
TC k141_141329 k141_141329_91 92733 93902 + 3.A.15.2.1
CAZyme k141_141329 k141_141329_92 94009 95037 + GT4
STP k141_141329 k141_141329_93 95051 96217 + Aminotran_1_2
pfam k141_141329 k141_141329_94 96259 97533 + Wzy_C
CAZyme k141_141329 k141_141329_95 97520 98530 + GT8
CAZyme k141_141329 k141_141329_96 98538 99572 + GT4
CAZyme k141_141329 k141_141329_97 99569 100672 + GT4
pfam k141_141329 k141_141329_98 100786 102036 - UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_141329 k141_141329_99 102478 103425 + GT9
Gene ID: k141_141329_89
Type: TC
Location: 89193 - 91232 (+)
Gene ID: k141_141329_90
Type: TC
Location: 91234 - 92730 (+)
Gene ID: k141_141329_91
Type: TC
Location: 92733 - 93902 (+)
Gene ID: k141_141329_92
Type: CAZyme
Location: 94009 - 95037 (+)
Gene ID: k141_141329_93
Type: STP
Location: 95051 - 96217 (+)
Gene ID: k141_141329_94
Type: pfam
Location: 96259 - 97533 (+)
Gene ID: k141_141329_95
Type: CAZyme
Location: 97520 - 98530 (+)
Gene ID: k141_141329_96
Type: CAZyme
Location: 98538 - 99572 (+)
Gene ID: k141_141329_97
Type: CAZyme
Location: 99569 - 100672 (+)
Gene ID: k141_141329_98
Type: pfam
Location: 100786 - 102036 (-)
Gene ID: k141_141329_99
Type: CAZyme
Location: 102478 - 103425 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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