Cluster: SW120_bin.66_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: SW120_bin.66
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_27242 | k141_27242_1 | 52 | 1473 | - | GH1 |
| TC | k141_27242 | k141_27242_2 | 1549 | 3306 | - | 4.A.3.1.1 |
| TF | k141_27242 | k141_27242_3 | 3582 | 4592 | + | LacI |
| TC | k141_27242 | k141_27242_4 | 4927 | 6687 | - | 4.A.3.1.1 |
| CAZyme | k141_27242 | k141_27242_5 | 6864 | 8306 | - | GH1 |
| TF | k141_27242 | k141_27242_6 | 8648 | 9685 | + | LacI |
| CAZyme | k141_27242 | k141_27242_7 | 9947 | 11386 | - | GH1 |
| TC | k141_27242 | k141_27242_8 | 11453 | 13180 | - | 4.A.3.1.1 |
Gene ID: k141_27242_1
Type: CAZyme
Location: 52 - 1473 (-)
Type: CAZyme
Location: 52 - 1473 (-)
Gene ID: k141_27242_2
Type: TC
Location: 1549 - 3306 (-)
Type: TC
Location: 1549 - 3306 (-)
Gene ID: k141_27242_3
Type: TF
Location: 3582 - 4592 (+)
Type: TF
Location: 3582 - 4592 (+)
Gene ID: k141_27242_4
Type: TC
Location: 4927 - 6687 (-)
Type: TC
Location: 4927 - 6687 (-)
Gene ID: k141_27242_5
Type: CAZyme
Location: 6864 - 8306 (-)
Type: CAZyme
Location: 6864 - 8306 (-)
Gene ID: k141_27242_6
Type: TF
Location: 8648 - 9685 (+)
Type: TF
Location: 8648 - 9685 (+)
Gene ID: k141_27242_7
Type: CAZyme
Location: 9947 - 11386 (-)
Type: CAZyme
Location: 9947 - 11386 (-)
Gene ID: k141_27242_8
Type: TC
Location: 11453 - 13180 (-)
Type: TC
Location: 11453 - 13180 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_27242_6 | vegetarian > omnivore | 1.02708 | 0.03181 |