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Cluster: SW117_0_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_32289 k141_32289_257 305300 306934 - 8.A.7.1.1
STP k141_32289 k141_32289_258 306970 307233 - PTS-HPr
TC k141_32289 k141_32289_259 307230 309173 - 4.A.2.1.20
STP k141_32289 k141_32289_260 309188 310099 - PfkB
CAZyme k141_32289 k141_32289_261 310454 312712 - GH2
TC k141_32289 k141_32289_262 312696 314054 - 2.A.2.3.2
TC k141_32289 k141_32289_263 314227 315162 + 1.A.35.3.2
pfam k141_32289 k141_32289_264 315212 315712 + DNA_binding_1 | Methyltransf_1N
pfam k141_32289 k141_32289_265 315714 316232 - SpoU_methylase
CAZyme k141_32289 k141_32289_266 316216 317334 - CE9
Gene ID: k141_32289_257
Type: TC
Location: 305300 - 306934 (-)
Gene ID: k141_32289_258
Type: STP
Location: 306970 - 307233 (-)
Gene ID: k141_32289_259
Type: TC
Location: 307230 - 309173 (-)
Gene ID: k141_32289_260
Type: STP
Location: 309188 - 310099 (-)
Gene ID: k141_32289_261
Type: CAZyme
Location: 310454 - 312712 (-)
Gene ID: k141_32289_262
Type: TC
Location: 312696 - 314054 (-)
Gene ID: k141_32289_263
Type: TC
Location: 314227 - 315162 (+)
Gene ID: k141_32289_264
Type: pfam
Location: 315212 - 315712 (+)
Gene ID: k141_32289_265
Type: pfam
Location: 315714 - 316232 (-)
Gene ID: k141_32289_266
Type: CAZyme
Location: 316216 - 317334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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