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Cluster: SW117_0_sub_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_79079 k141_79079_12 9412 10632 - GT4
CAZyme k141_79079 k141_79079_13 10652 11749 - GT4
pfam k141_79079 k141_79079_14 11769 12938 - Radical_SAM | SPASM
pfam k141_79079 k141_79079_15 12941 13990 - Acyl_transf_3
CAZyme k141_79079 k141_79079_16 13991 15193 - GT4
CAZyme k141_79079 k141_79079_17 15194 16318 - GT4
TC k141_79079 k141_79079_18 16349 17845 - 9.B.18.1.2
TC k141_79079 k141_79079_19 17859 18665 - 8.A.3.2.1
TC k141_79079 k141_79079_20 18649 19452 - 8.A.3.2.4
Gene ID: k141_79079_12
Type: CAZyme
Location: 9412 - 10632 (-)
Gene ID: k141_79079_13
Type: CAZyme
Location: 10652 - 11749 (-)
Gene ID: k141_79079_14
Type: pfam
Location: 11769 - 12938 (-)
Gene ID: k141_79079_15
Type: pfam
Location: 12941 - 13990 (-)
Gene ID: k141_79079_16
Type: CAZyme
Location: 13991 - 15193 (-)
Gene ID: k141_79079_17
Type: CAZyme
Location: 15194 - 16318 (-)
Gene ID: k141_79079_18
Type: TC
Location: 16349 - 17845 (-)
Gene ID: k141_79079_19
Type: TC
Location: 17859 - 18665 (-)
Gene ID: k141_79079_20
Type: TC
Location: 18649 - 19452 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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