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Cluster: SW117_0_sub_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59544 k141_59544_87 93372 95264 + 9.B.18.2.1
TC k141_59544 k141_59544_88 95292 96686 + 2.A.38.4.1
STP k141_59544 k141_59544_89 96726 97367 + Pyr_redox | TrkA_C
pfam k141_59544 k141_59544_90 97382 98155 + KduI
TC k141_59544 k141_59544_91 98292 99146 + 3.A.1.3.15
TC k141_59544 k141_59544_92 99242 99952 + 3.A.1.3.20
TC k141_59544 k141_59544_93 99936 100658 + 3.A.1.3.25
CAZyme k141_59544 k141_59544_94 100789 102117 - CE4
TC k141_59544 k141_59544_95 102394 104304 + 3.D.1.4.2
TC k141_59544 k141_59544_96 104304 105194 + 3.D.1.4.2
TC k141_59544 k141_59544_97 105195 105629 + 3.D.1.4.2
pfam k141_59544 k141_59544_98 105630 106019 + Complex1_30kDa
TC k141_59544 k141_59544_99 106019 107098 + 3.D.1.4.2
TC k141_59544 k141_59544_100 107113 107694 + 3.D.1.4.2
Gene ID: k141_59544_87
Type: TC
Location: 93372 - 95264 (+)
Gene ID: k141_59544_88
Type: TC
Location: 95292 - 96686 (+)
Gene ID: k141_59544_89
Type: STP
Location: 96726 - 97367 (+)
Gene ID: k141_59544_90
Type: pfam
Location: 97382 - 98155 (+)
Gene ID: k141_59544_91
Type: TC
Location: 98292 - 99146 (+)
Gene ID: k141_59544_92
Type: TC
Location: 99242 - 99952 (+)
Gene ID: k141_59544_93
Type: TC
Location: 99936 - 100658 (+)
Gene ID: k141_59544_94
Type: CAZyme
Location: 100789 - 102117 (-)
Gene ID: k141_59544_95
Type: TC
Location: 102394 - 104304 (+)
Gene ID: k141_59544_96
Type: TC
Location: 104304 - 105194 (+)
Gene ID: k141_59544_97
Type: TC
Location: 105195 - 105629 (+)
Gene ID: k141_59544_98
Type: pfam
Location: 105630 - 106019 (+)
Gene ID: k141_59544_99
Type: TC
Location: 106019 - 107098 (+)
Gene ID: k141_59544_100
Type: TC
Location: 107113 - 107694 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_59544_93 vegetarian > omnivore 1.04514 0.04047

🧭 Explore Read Mapping of CGC

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