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Cluster: SW116_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149363 k141_149363_23 25607 26689 + 2.A.6.2.28
TC k141_149363 k141_149363_24 26816 29848 + 2.A.6.2.33
pfam k141_149363 k141_149363_25 29853 31175 + OEP | OEP
CAZyme k141_149363 k141_149363_26 31252 32361 + PL10_1
TC k141_149363 k141_149363_27 32663 33820 - 9.B.97.1.2
TC k141_149363 k141_149363_28 34083 34949 + 1.A.23.2.2
CAZyme k141_149363 k141_149363_29 35049 37172 - GH50
CAZyme k141_149363 k141_149363_30 37213 38175 - GH16_3
CAZyme k141_149363 k141_149363_31 38220 40880 - CBM57 | GH2
CAZyme k141_149363 k141_149363_32 40888 42906 - GH136
pfam k141_149363 k141_149363_33 43164 44951 - SusD_RagB | SusD-like_3
TC k141_149363 k141_149363_34 44974 48018 - 1.B.14.6.1
Gene ID: k141_149363_23
Type: TC
Location: 25607 - 26689 (+)
Gene ID: k141_149363_24
Type: TC
Location: 26816 - 29848 (+)
Gene ID: k141_149363_25
Type: pfam
Location: 29853 - 31175 (+)
Gene ID: k141_149363_26
Type: CAZyme
Location: 31252 - 32361 (+)
Gene ID: k141_149363_27
Type: TC
Location: 32663 - 33820 (-)
Gene ID: k141_149363_28
Type: TC
Location: 34083 - 34949 (+)
Gene ID: k141_149363_29
Type: CAZyme
Location: 35049 - 37172 (-)
Gene ID: k141_149363_30
Type: CAZyme
Location: 37213 - 38175 (-)
Gene ID: k141_149363_31
Type: CAZyme
Location: 38220 - 40880 (-)
Gene ID: k141_149363_32
Type: CAZyme
Location: 40888 - 42906 (-)
Gene ID: k141_149363_33
Type: pfam
Location: 43164 - 44951 (-)
Gene ID: k141_149363_34
Type: TC
Location: 44974 - 48018 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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