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Cluster: SW116_3_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_134156 k141_134156_12 12802 14901 + GH92
pfam k141_134156 k141_134156_13 15112 15726 + DUF4294
TC k141_134156 k141_134156_14 15758 16720 - 2.A.115.1.2
TF k141_134156 k141_134156_15 16977 17501 + GerE
pfam k141_134156 k141_134156_16 18700 19389 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_134156 k141_134156_17 19396 21462 - GH172
CAZyme k141_134156 k141_134156_18 21534 23561 - GH92 | GH92
pfam k141_134156 k141_134156_19 23564 24226 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_134156 k141_134156_20 24304 26094 - GH31
TC k141_134156 k141_134156_21 26225 27799 - 8.A.46.1.6
TC k141_134156 k141_134156_22 27811 31077 - 1.B.14.6.1
Gene ID: k141_134156_12
Type: CAZyme
Location: 12802 - 14901 (+)
Gene ID: k141_134156_13
Type: pfam
Location: 15112 - 15726 (+)
Gene ID: k141_134156_14
Type: TC
Location: 15758 - 16720 (-)
Gene ID: k141_134156_15
Type: TF
Location: 16977 - 17501 (+)
Gene ID: k141_134156_16
Type: pfam
Location: 18700 - 19389 (-)
Gene ID: k141_134156_17
Type: CAZyme
Location: 19396 - 21462 (-)
Gene ID: k141_134156_18
Type: CAZyme
Location: 21534 - 23561 (-)
Gene ID: k141_134156_19
Type: pfam
Location: 23564 - 24226 (-)
Gene ID: k141_134156_20
Type: CAZyme
Location: 24304 - 26094 (-)
Gene ID: k141_134156_21
Type: TC
Location: 26225 - 27799 (-)
Gene ID: k141_134156_22
Type: TC
Location: 27811 - 31077 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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