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Cluster: SW116_3_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_114814 k141_114814_36 52034 52951 - 2.A.4.7.9
CAZyme k141_114814 k141_114814_37 53798 56125 - GH3
CAZyme k141_114814 k141_114814_38 56597 58402 + GH9
CAZyme k141_114814 k141_114814_39 58461 59885 + CE20
TF k141_114814 k141_114814_40 60392 60985 + GerE
STP k141_114814 k141_114814_41 61061 62071 + FecR
TC k141_114814 k141_114814_42 62358 65633 + 1.B.14.6.1
pfam k141_114814 k141_114814_43 65649 67325 + SusD_RagB | SusD-like_3
pfam k141_114814 k141_114814_44 67422 68615 + Metallophos | Pur_ac_phosph_N
CAZyme k141_114814 k141_114814_45 68627 70837 + GH36
pfam k141_114814 k141_114814_46 70988 71839 + Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_114814 k141_114814_47 71947 74400 - GH18
pfam k141_114814 k141_114814_48 74462 75208 - DUF5119
NULL(UNKNOWN) k141_114814 k141_114814_49 75293 75448 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_114814 k141_114814_50 75726 76385 - 3.A.1.122.2
Gene ID: k141_114814_36
Type: TC
Location: 52034 - 52951 (-)
Gene ID: k141_114814_37
Type: CAZyme
Location: 53798 - 56125 (-)
Gene ID: k141_114814_38
Type: CAZyme
Location: 56597 - 58402 (+)
Gene ID: k141_114814_39
Type: CAZyme
Location: 58461 - 59885 (+)
Gene ID: k141_114814_40
Type: TF
Location: 60392 - 60985 (+)
Gene ID: k141_114814_41
Type: STP
Location: 61061 - 62071 (+)
Gene ID: k141_114814_42
Type: TC
Location: 62358 - 65633 (+)
Gene ID: k141_114814_43
Type: pfam
Location: 65649 - 67325 (+)
Gene ID: k141_114814_44
Type: pfam
Location: 67422 - 68615 (+)
Gene ID: k141_114814_45
Type: CAZyme
Location: 68627 - 70837 (+)
Gene ID: k141_114814_46
Type: pfam
Location: 70988 - 71839 (+)
Gene ID: k141_114814_47
Type: CAZyme
Location: 71947 - 74400 (-)
Gene ID: k141_114814_48
Type: pfam
Location: 74462 - 75208 (-)
Gene ID: k141_114814_49
Type:
Location: 75293 - 75448 (-)
Gene ID: k141_114814_50
Type: TC
Location: 75726 - 76385 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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