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Cluster: SW115_maxbin.005_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_107129 k141_107129_11 15566 18016 - 4.A.1.1.8
NULL(UNKNOWN) k141_107129 k141_107129_12 18038 18157 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_107129 k141_107129_13 18241 18960 + GntR
TC k141_107129 k141_107129_14 19267 20583 + 3.A.1.1.45
TC k141_107129 k141_107129_15 20671 21525 + 3.A.1.1.45
TC k141_107129 k141_107129_16 21525 22364 + 3.A.1.1.45
TC k141_107129 k141_107129_17 22433 23632 + 3.A.1.1.22
CAZyme k141_107129 k141_107129_18 24088 26355 - GT35
CAZyme k141_107129 k141_107129_19 26486 27991 - GH77
Gene ID: k141_107129_11
Type: TC
Location: 15566 - 18016 (-)
Gene ID: k141_107129_12
Type:
Location: 18038 - 18157 (+)
Gene ID: k141_107129_13
Type: TF
Location: 18241 - 18960 (+)
Gene ID: k141_107129_14
Type: TC
Location: 19267 - 20583 (+)
Gene ID: k141_107129_15
Type: TC
Location: 20671 - 21525 (+)
Gene ID: k141_107129_16
Type: TC
Location: 21525 - 22364 (+)
Gene ID: k141_107129_17
Type: TC
Location: 22433 - 23632 (+)
Gene ID: k141_107129_18
Type: CAZyme
Location: 24088 - 26355 (-)
Gene ID: k141_107129_19
Type: CAZyme
Location: 26486 - 27991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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